biochemistry

BIOCHEMISTRY

Biochemistry & Molecular Biology Links:

SeqAnalRef - Bibliographic reference data bank relative to papers dealing with sequence analysis.
Sequence Retrieval System at EMBL - Sequence Retrieval System.
SFINX - Integrated graphical analysis of sequence.
Stockholm - System for marking up features in a multiple alignment.
Swiss EMBnet - Several databases.
BRENDA - The Comprehensive Enzyme Information System.
Caenorhabditis elegans WWW Server
CATH Protein Structure Classification - Protein Structure Classification.
Cell and Molecular Biology Online - Informational Resource for Cell and Molecular Biologists.
Computational Biochemistry Research Group (CBRG) - Algorithms for biological questions and large scale computations.
Computational Molecular Biology At NIH
DBGET at Kyoto University Bioinformatics Center - Simple database retrieval system for a diverse range of molecular biology databases.
Dotter - Graphical dotplot program for detailed comparison of two sequences.
EMBL-EBI - Searches Databanks: EMBL Nucleotides.
European Bioinformatics Institute (EMBL-EBI) - Various sequence database similarity search tools such as Fasta, Blast, MPsrch and Scanps.
ExPASy Proteomics Server - Analysis of protein sequences and structures as well as 2-D PAGE .
Expressed Sequence Tags Database (dbEST) - Expressed Sequence Tags from a number of organisms.
Fasta Protein Database Query - Sequence similarity searching against nucleotide and protein databases using Fasta.
Genamics' GenomeSeek - Access to current and completed eukaryal and microbial genome projects.
GenomeNet - Bioinformatics Center, Institute for Chemical Research, Kyoto University.
ICE (the Institute for Candida Experimentation) - The Candida albicans physical map website.
IMGT® - International ImMunoGeneTics information system; integrated knowledge resource specialized in the immunoglobulins (IG), T cell receptors (TR), major histocompatibility complex (MHC), immunoglobulin superfamily (IgSF), major histocompatibility complex superfamily (MhcSF) and related proteins of the immune system (RPI) of human and other vertebrate species.
LDDB - Sequence-based Integrated Maps of the Human Genome.
LPSN - List of Prokaryotic names with Standing in Nomenclature.
MHCPEP - Database comprising over 13000 peptide sequences known to bind MHC molecules.
.NNPREDICT - Protein Secondary Structure Prediction.
Nucleic Acids Database (NDB) - Repository of three-dimensional structural information about nucleic acids.
Pfam - Large collection of multiple sequence alignments and hidden Markov models.
Phylogeny : Phylip programs - Phylip programs.
PredictProtein e-mail Server (PHD) - Predict the Secondary Structure of a Protein.
Protein Analysis Toolkit - Protein analysis toolkit for integrated biocomputing.
Protein Data Bank (RCSB PDB) - Variety of tools and resources for studying the structures of biological macromolecules
Blixem - a graphical blast viewer - Interactive browser of pairwise Blast matches.
BLOCKS - Short multiply aligned ungapped segments corresponding to the most highly conserved regions of proteins.
REBASE® - Restriction Enzyme Database.

Swiss-Prot - In-Silico Analysis of Proteins.
TMHMM - Prediction of transmembrane helices in proteins - Prediction of transmembrane helices in proteins.
Medical Biochemistry
http://university.arabsbook.com/forum78/thread29301.html 


AbCheck - Antibody Sequence Test - Allows you to test an antibody sequence against the Kabat sequence database.
Addgene - Archiving and distribution of plasmids that appear in published articles.
AOPredict - Antisense Oligonucleotide Prediction Program.
BankIt - GenBank Direct DNA sequence Submission.
Basic Local Alignment Search Tool (BLAST) at NCBI - Finds regions of local similarity between sequences.
Belgian EMBnet Node (BEN) - Access to databanks with nucleic acid and protein sequences as well as software.
Belvu - X-windows viewer for multiple sequence alignments.
BioExchange
Biology Links at Harvard University - At the Department of Molecular and Cellular Biology.
Biology Online - Information in the Life Sciences.
BioNetbook - A directory of Web pages for Biology.
BIOSCI/Bionet - A set of electronic communication forums.
Biotechnology Centre of Oslo - The Biotechnology Centre of Oslo.
Molecular Biology Resources (on PID)
Molecular Biology Toolbox
MSPcrunch - MSPcrunch - a BLAST enhancement filter.
National Institute of Genetics, Japan - Contains several databases.
National Institutes of Health (NIH) - National Institutes of Health, USA.
NCBI - National Center for Biotechnology Information.
NCBI Entrez - Cross-database search

MICROBIOLOGY

Microbiology Madigan, Martinko and Parker Biology of Microorganisms 8th edition, 2000 - Southern Illinois University, Carbondale Harry L. T. Mobley, George L. Mendz, Stuart L. Hazell (Editors) Helicobacter pylori: Physiology and Genetics 2001 - ASM Press, 626 pp ISBN 9781555812133 Samual Baron et al. Medical Microbiology 4th edition, 1996 - University of Texas Medical Branch, 1273 pp Richard Hunt et al. Tradução: Myres Hopkins e Paulo Moretti Microbiologia and Imunologia On-line 2011 - University of South Carolina School of Medicine Portuguese Richard Hunt et al. Traducido por Fernando Enríquez-Rincón, Paula Figueroa, Sarah M. Castillo-Jorge Microbiologia and Inmunologia On-line 2011 - University of South Carolina School of Medicine Spanish Richard Hunt et al. Microbiology and Immunology On-line 2011 - The Board of Trustees of the University of South Carolina Kim A. Brogden, Janet M. Guthmiller Polymicrobial Diseases 2002 - ASM Press, 450 pp ISBN 1-55581244-9

anatom

Anatomy   Gray Henry 1918 Edition: Gray's Anatomy of the Human Body 1918 - Bartleby Bookstore Edward C. Klatt, Matt Bingham Anatomical Images Rick Kulkarni et al. Anatomy Medscape Reference 2011 - WebMD   Omar Faiz, David Moffat Anatomy at a Glance 2002 - Blackwell Science, 176 pp; 6 MByte ISBN 1405133481   Carl Ernest Bock. Translated by Ronald A. Bergman and Adel K. Afifi. Atlas of Human Anatomy 1841   Ronald A. Bergman, Adel K. Afifi, Jean J. Jew, Paul C. Reimann Atlas of Human Anatomy in Cross Section 2004 - Anatomy Atlases   Ronald A. Bergman, Adel K. Afifi, Paul M. Heidger Atlas of Microscopic Anatomy - A Functional Approach Companion to Histology and Neuroanatomy 1999 - Anatomy Atlases

C. Carl Jaffe,Patrick J. Lynch Chest X-ray Thoracic Anatomy Resource 2002 - Yale University   Clemente Susini's Wax Anatomical Models 2002 - Università of Cagliari   Human Anatomy Online Laboratory Dissections   Ronald A. Bergman, Adel K. Afifi, Ryosuke Miyauchi Illustrated Encyclopedia of Human Anatomic Variation 2006 - Anatomy Atlases   Michael Richardson Muscle Atlas 1997 - University of Washington Edward C. Klatt Neuroanatomy Tutorial - The University of Utah   Anthony L. Alcantara, Huan Nguyen Radiologic Anatomy 1999 - WSU Department of Radiology   Center for Human Simulation Visible Human Female Browser 2011 - The University of Michigan   Visible Human Project Anatomically detailed, three-dimensional representations of the normal male and female human bodies 2010 - U.S. National Library of Medicine   Keith A. Johnson, J. Alex Becker Whole Brain Atlas 1999

                                                 the virtual immunology lab--click here                                                        !!

  DIAGNOSIS OF DISEASE BASED ON IMMUNE RESPONSE—A VIRTUAL LABORATORY EXERCISE

Components of the immune system called antibodies are found in the liquid portion of blood and help protect the body from harm. Antibodies can be used also outside the body in a laboratory-based assay to help diagnose disease caused by malfunctions of the immune system or by infections.

This virtual laboratory will demonstrate how such a test, termed an enzyme-linked immunosorbent assay (ELISA), is carried out and some of the key experimental problems that may be encountered. Students will learn about the assay procedure and the equipment and materials that are needed. By completing this exercise, students will gain a better understanding of experimental design, key concepts in immunological reactions, and interpretation of data.
Concepts Covered
The basis of humoral immunity
The foundation for ELISA
Potential errors in conducting an ELISA
Sensitivity and specificity of a diagnostic test
Potential Experimental Problems
ELISA is used in many laboratories to determine whether a particular antibody is present in a patient's blood sample. Although the procedure is routine and straightforward, it involves a number of variables, such as reagent selection, temperature, volume measurement, and time, which if not adjusted correctly can affect subsequent steps and the test outcome. This virtual laboratory has been developed so that when a mistake is made, you will not get the correct answer. The program keeps track of errors made throughout the experiment and generates a report at the end.
Limitations of the Test
This general test has some important limitations.

First, a positive result correctly confirming the presence of antibody does not necessarily mean the patient is sick. The body can continue to produce antibodies even though the person may have had the disease earlier and recovered.

Second, people may be poor producers of antibody or may have some interfering substance in their blood. The amount of antibody, consequently, may be too low to measure accurately or may go undetected. This result is termed a false negative.

Third, a positive result may occur if an unrelated antibody reacts with the antigen nonspecifically. Unlike a true-positive result where the specific antibody is detected, however, this positive reaction is false. Testing many patients and running tests more than once helps lab workers distinguish a true from a false result. To avoid simple experimental mistakes leading to incorrect results, scientists conduct tests using duplicate (or, sometimes, more than two) samples.

COURTESY:howard hughes medical institute

PHYSIOLOGY

TEXTBOOK OF HUMAN PHYSIOLOGY


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Practical Physiology
by Marcus Seymour Pembrey

Publisher: Longmans, Green 1910
ISBN/ASIN: 1112517863
Number of pages: 508

Description:
Physiology is the basis of medicine, and the further advance of these sciences depends mainly upon the "experimental method." The medical student, the future physician, should undergo a training in practical physiology, for thereby he learns the most important of all lessons; he learns to observe, to draw conclusions from his observations, and to unravel the causes of his failures.

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ATLAS

Landmarks for Peripheral Nerve Blocks Upper and Lower Extremities 2nd ed. 

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Atlas of Regional Anesthesia, 3rd ed. 2006 

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Peripheral Nerve Blocks: A Color Atlas, 3rd Edition 2009 

  

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Atlas of Ultrasound-Guided Procedures in Interventional Pain Management

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anaesthesia

PRINCIPLES AND PRACTICE OF ANAESTHESIA FOR THORACIC SURGERY 2011

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Landmarks for Peripheral Nerve Blocks Upper and Lower Extremities 2nd ed. 

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Atlas of Regional Anesthesia, 3rd ed. 2006 

download   or   download 



Peripheral Nerve Blocks: A Color Atlas, 3rd Edition 2009 

  

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anaesthesia

PRINCIPLES AND PRACTICE OF ANAESTHESIA FOR THORACIC SURGERY 2011

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nephrology

2.  Atlas of diseases of kidney

Robert W. Schrier
Department of Medicine, University of Colorado School of Medicine Denver
1999
1000 pp

SUTURE TECHNIQUES

Suture Technique CD

Suture Technique CD
MD Robert Goldweber | Time: 53:06 min | January 1, 2002 | ASIN: B00007DT8G | avi | 585 MB

Whether you're a medical student, a resident, a primary care physician or you practice in an emergency department, you can improve your suture skills with this detailed instruction. As you practice towards a cosmetically perfect technique, your confidence will increase, especially when dealing with complex wounds.

Areas of study include: methods of closure, closure materials, anesthetics, suture removal, infection, prophylaxis, when to call in a plastic surgeon, recapping techniques and more.
TOPICS COVERED:
Primary objectives in wound care
Methods of closure
Anesthetics
Closure materials
When to call a plastic surgeon
Suture tray set-up
Suture removal
Signs of infection
Hepatitis C



SUTURING TECHNIQUES
taught in this instruction:
Simple interrupted
Subcutaneous
Running stitch
Vertical mattress
Horizontal mattress
Y- or V-laceration mattress
Figure-of-eight
Slip knot
Subcuticular
Proxi-strips or Steri-strips
Dog-ear repair
Z-plasty
Elliptical incisions
Tongue lacerations
Fingertip avulsion laceration


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Drug Therapy for Gastrointestinal Disease

Drug Therapy for Gastrointestinal Disease
By Michael J.G. Farthing, Anne B Ballinger


* Publisher: Informa HealthCare
* Number Of Pages: 300
* Publication Date: 2001-05
* ISBN-10 / ASIN: 1853177334

Product Description:
This book is an invaluable clinical reference for the therapeutic management of gastrointestinal and liver diseases which the gastroenterologist and trainee encounter in their practice. Various drugs and their interactions with their intended site and also with other drugs are discussed from a practical point of view. This book is not a treatise on gastrointestinal pharmacology but a practical guide to the therapeutic use of GI drugs.


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ULTRASOUND IMAGING

ISBN 978-953-307-239-5, Hard cover, 210 pages
Publisher: InTech
Publication date: April 2011
Subject: Medical Imaging


In this book, we present a dozen state of the art developments for ultrasound imaging, for example, hardware implementation, transducer, beamforming, signal processing, measurement of elasticity and diagnosis. The editors would like to thank all the chapter authors, who focused on the publication of this book.

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2.  ATLAS OF DISEASE OF KIDNEY

Robert W. Schrier
Department of Medicine, University of Colorado School of Medicine Denver
1999
1000 pp

3.Pain and Disability: Clinical, Behavioral, and Public Policy Perspectives
by M. Osterweis, A. Kleinman, D. Mechanic

Publisher: National Academies Press 1987
ISBN/ASIN: 0309074584
ISBN-13: 9780309074582
Number of pages: 323

Description:
Pain is the most common complaint presented to physicians. This volume covers the epidemiology and physiology of pain; psychosocial contributions to pain and illness behavior; promising ways of assessing and measuring chronic pain and dysfunction; clinical aspects of prevention, diagnosis, treatment, and rehabilitation; and how the SSA's benefit structure and administrative procedures may affect pain complaints.

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4.Blood donors and the supply of blood and blood products
by F. J. Manning, L. R. Sparacino

Publisher: National Academies Press 1996
ISBN/ASIN: 1151666688
Number of pages: 137

Description:
This volume discusses the current state of the nation's blood supply -- including studies of blood availability, ways of enhancing blood collection and distribution, frozen red cell technology, logistical concerns in prepositioning frozen blood, extended liquid storage of red cells, and blood substitutes.

Home page url
  DOWNLOADor read it online here:

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Essential Drugs
Practical guidelines intended for physicians, pharmacists, nurses and medical auxiliaries

3rd edition
Médecins sans Frontières
2006
344 pp


15.  EMERGENCY MEDICINE
Medscape Reference

Jonathan Adler et al.
WebMD
2011

Urologic Clinics of North America,nov 2008

Urologic Clinics of North America
Volume 35, Issue 4, Pages 543-710 (November 2008)
Contemporary Understanding and Management of Renal Cortical Rumors
Edited by P. Russo
The authors of this issue of the Urologic Clinics of North America provide a comprehensive review of the great progress made, on numerous fronts, in the understanding and management of renal cortical tumors. Their work illuminates a clear and hopeful path to our future goal of further decreasing the morbidity and mortality of renal cancer.
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Preventing malignancies of reproductive tract

Preventing Malignancies of the Reproductive Tract

Obstetrics and Gynecology Clinics
Volume 34, Issue 4, Pages 639-808 (December 2007)
Preventing Malignancies of the Reproductive Tract
Edited by Carolyn Y. Muller MD
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Obstetrics and Gynecology Clinics